Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-ii oxidase subunit cbdx | C5715_10895 | Not Available | Positive | 2042777 - 2042869 | 3597.68 |
| phytase appa | C5715_10900 | Not Available | Positive | 2042949 - 2044247 | 47100.5 |
| tyrosine-protein kinase etk | C5715_10905 | Not Available | Negative | 2044367 - 2046547 | 81264.5 |
| protein-tyrosine-phosphatase | C5715_10910 | Not Available | Negative | 2046567 - 2047013 | 16386.9 |
| polysaccharide export protein wza | C5715_10915 | Not Available | Negative | 2047001 - 2048140 | 41743.2 |
| yjbh domain-containing protein | C5715_10920 | Not Available | Negative | 2048186 - 2050282 | 78703.3 |
| hypothetical protein | C5715_10925 | Not Available | Negative | 2050282 - 2051028 | 27355.7 |
| yjbf family lipoprotein | C5715_10930 | Not Available | Negative | 2051025 - 2051669 | 24225.9 |
| threonine-rich inner membrane protein gfca | C5715_10935 | Not Available | Negative | 2051776 - 2052081 | 9447.98 |
| cold-shock protein csph | C5715_10940 | Not Available | Negative | 2052522 - 2052734 | 7720.48 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





