Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon starvation induced protein csid | C5715_10795 | Not Available | Positive | 2027387 - 2028364 | 37382.6 |
| l-2-hydroxyglutarate oxidase | C5715_10800 | Not Available | Positive | 2028384 - 2029652 | 46127.7 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | C5715_10805 | Not Available | Positive | 2029675 - 2031123 | 51778.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C5715_10810 | Not Available | Positive | 2031137 - 2032417 | 45651.2 |
| Trna-met | Not Available | Not Available | Positive | 2032603 - 2032679 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 2032695 - 2032769 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 2032804 - 2032878 | Not Available |
| Trna-gln | Not Available | Not Available | Positive | 2032913 - 2032987 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 2033011 - 2033095 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2033105 - 2033181 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





