Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5715_10680 | Not Available | Positive | 2004190 - 2004546 | 13444.3 |
| type vi secretion system tip protein vgrg | C5715_10685 | Not Available | Positive | 2004779 - 2006773 | 74139.5 |
| duf1795 domain-containing protein | C5715_10690 | Not Available | Positive | 2006824 - 2007276 | 17196.6 |
| type iv secretion protein rhs | C5715_10695 | Not Available | Positive | 2007295 - 2007618 | 11145.5 |
| is91 family transposase | C5715_10700 | Not Available | Negative | 2007619 - 2008294 | 25932.5 |
| plasmid stabilization protein | C5715_10710 | Not Available | Positive | 2008624 - 2008875 | 9194.91 |
| type ii toxin-antitoxin system rele/pare family toxin | C5715_10715 | Not Available | Positive | 2008865 - 2009146 | 11006.5 |
| hypothetical protein | C5715_10720 | Not Available | Positive | 2009292 - 2009615 | 12228.8 |
| hypothetical protein | C5715_10725 | Not Available | Positive | 2009660 - 2009905 | 9313.35 |
| hypothetical protein | C5715_10730 | Not Available | Positive | 2009895 - 2010110 | 7985.68 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





