Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter substrate-binding protein | C5715_10575 | Not Available | Positive | 1987063 - 1988208 | 42325.4 |
| abc transporter atp-binding protein | C5715_10580 | Not Available | Positive | 1988226 - 1989239 | 37033.9 |
| abc transporter permease | C5715_10585 | Not Available | Positive | 1989240 - 1990181 | 34367.1 |
| abc transporter permease | C5715_10590 | Not Available | Positive | 1990171 - 1990965 | 28683.5 |
| aminobutyraldehyde dehydrogenase | C5715_10595 | Not Available | Positive | 1990987 - 1992411 | 50830.9 |
| antibiotic acetyltransferase | C5715_10600 | Not Available | Positive | 1992634 - 1993443 | 31082.3 |
| stress response membrane protein yncl | C5715_10605 | Not Available | Negative | 1993845 - 1993940 | 3490.44 |
| ghot/ortt family toxin | C5715_10610 | Not Available | Positive | 1994086 - 1994307 | 8514.81 |
| duf2526 domain-containing protein | C5715_10615 | Not Available | Positive | 1994393 - 1994626 | 8800.41 |
| hypothetical protein | C5715_10620 | Not Available | Negative | 1994627 - 1995076 | 15816.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





