Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system hok family toxin | C5715_10470 | Not Available | Negative | 1969078 - 1969227 | 5645.21 |
| hypothetical protein | C5715_10475 | Not Available | Positive | 1969374 - 1969562 | 7112.55 |
| hamp domain-containing protein | C5715_10480 | Not Available | Positive | 1969626 - 1971266 | 58817.3 |
| lysr family transcriptional regulator | C5715_10485 | Not Available | Negative | 1971304 - 1972227 | 33366.5 |
| duf1338 domain-containing protein | C5715_10490 | Not Available | Positive | 1972444 - 1973787 | 51047.7 |
| glucan biosynthesis protein d | C5715_10500 | Not Available | Positive | 1974012 - 1975667 | 62774.2 |
| hypothetical protein | C5715_10505 | Not Available | Negative | 1975588 - 1975791 | 7370.5 |
| duf465 domain-containing protein | C5715_10510 | Not Available | Positive | 1975807 - 1976031 | 8878.79 |
| 50s ribosomal protein l7/l12-serine acetyltransferase | C5715_10515 | Not Available | Positive | 1976094 - 1976633 | 20570.6 |
| hypothetical protein | C5715_10520 | Not Available | Negative | 1976625 - 1977605 | 35771.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





