Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-phosphorus lyase complex subunit phnj | C5715_10365 | Not Available | Negative | 1945165 - 1946010 | 31832.9 |
| carbon-phosphorus lyase complex subunit phni | C5715_10370 | Not Available | Negative | 1946003 - 1947067 | 38884.1 |
| phosphonate c-p lyase system protein phnh | C5715_10375 | Not Available | Negative | 1947067 - 1947651 | 20985.5 |
| phosphonate c-p lyase system protein phng | C5715_10380 | Not Available | Negative | 1947648 - 1948100 | 16562.8 |
| phosphonate metabolism transcriptional regulator phnf | C5715_10385 | Not Available | Negative | 1948101 - 1948826 | 27604.0 |
| phosphonate abc transporter, permease protein phne | C5715_10390 | Not Available | Negative | 1948847 - 1949626 | 28399.3 |
| phosphonates-binding periplasmic protein | C5715_10395 | Not Available | Negative | 1949687 - 1950703 | 37372.6 |
| phosphonate abc transporter atp-binding protein | C5715_10400 | Not Available | Negative | 1950728 - 1951516 | 29457.4 |
| voc family protein | C5715_10405 | Not Available | Negative | 1951649 - 1952092 | 16147.1 |
| duf2773 domain-containing protein | C5715_10410 | Not Available | Positive | 1952310 - 1954616 | 86317.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





