Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsbc family protein | C5715_09570 | Not Available | Positive | 1801244 - 1802314 | 39601.5 |
| conjugal transfer protein trbc | C5715_09575 | Not Available | Positive | 1802307 - 1804598 | 86946.0 |
| relaxase nikb | C5715_09580 | Not Available | Negative | 1804635 - 1807334 | 103962.0 |
| nika protein | C5715_09585 | Not Available | Negative | 1807345 - 1807677 | 12614.3 |
| molybdopterin-guanine dinucleotide biosynthesis protein mobc | C5715_09590 | Not Available | Positive | 1807911 - 1808246 | 12432.7 |
| duf4942 domain-containing protein | C5715_09595 | Not Available | Negative | 1808333 - 1809181 | 32198.6 |
| hypothetical protein | C5715_09600 | Not Available | Negative | 1809306 - 1809521 | 7715.31 |
| xre family transcriptional regulator | C5715_09610 | Not Available | Positive | 1809760 - 1810011 | 9909.82 |
| hypothetical protein | C5715_09615 | Not Available | Negative | 1810042 - 1810239 | 7366.91 |
| transposase | C5715_09620 | Not Available | Negative | 1810262 - 1811176 | 35024.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





