Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | C5715_09415 | Not Available | Positive | 1769463 - 1770023 | 20823.6 |
| prepilin peptidase | C5715_09420 | Not Available | Positive | 1770008 - 1770664 | 24567.9 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | C5715_09425 | Not Available | Positive | 1770664 - 1771956 | 45857.0 |
| conjugal transfer protein trae | C5715_09435 | Not Available | Positive | 1772346 - 1773170 | 30914.4 |
| type ix secretion system membrane protein porp/sprf | C5715_09440 | Not Available | Positive | 1773256 - 1774458 | 43154.0 |
| histidine phosphatase family protein | C5715_09445 | Not Available | Positive | 1774518 - 1775102 | 21973.4 |
| hypothetical protein | C5715_09450 | Not Available | Positive | 1775497 - 1775955 | 16979.3 |
| conjugal transfer protein | C5715_09455 | Not Available | Positive | 1775952 - 1776770 | 30549.5 |
| plasmid transfer atpase traj | C5715_09460 | Not Available | Positive | 1776767 - 1777915 | 42541.3 |
| conjugal transfer protein | C5715_09465 | Not Available | Positive | 1777912 - 1778202 | 11312.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





