Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pili assembly chaperone | C5715_09365 | Not Available | Positive | 1760311 - 1760904 | 23366.0 |
| hypothetical protein | C5715_09370 | Not Available | Positive | 1761045 - 1761236 | 7022.71 |
| pili assembly chaperone | C5715_09375 | Not Available | Positive | 1761233 - 1762300 | 38610.0 |
| pilus assembly protein pilp | C5715_09380 | Not Available | Positive | 1762300 - 1762737 | 15718.0 |
| piln family type ivb pilus formation outer membrane protein | C5715_09385 | Not Available | Positive | 1762751 - 1764433 | 59854.8 |
| pilus assembly protein pilo | C5715_09390 | Not Available | Positive | 1764426 - 1765721 | 48061.6 |
| type iv pilus biogenesis protein pilp | C5715_09395 | Not Available | Positive | 1765708 - 1766160 | 16099.4 |
| atp-binding protein | C5715_09400 | Not Available | Positive | 1766171 - 1767724 | 58127.1 |
| pilus assembly protein pilr | C5715_09405 | Not Available | Positive | 1767737 - 1768822 | 40638.8 |
| pilus assembly protein pilx | C5715_09410 | Not Available | Positive | 1768839 - 1769453 | 21260.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





