Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein hoke | C5715_09095 | Not Available | Negative | 1715815 - 1715967 | 5592.11 |
| hypothetical protein | C5715_09105 | Not Available | Negative | 1716231 - 1716407 | 6711.98 |
| glutamate--cysteine ligase | C5715_09110 | Not Available | Positive | 1716419 - 1717537 | 41682.6 |
| duf1158 domain-containing protein | C5715_09115 | Not Available | Positive | 1717603 - 1717851 | 9403.99 |
| hypothetical protein | C5715_09120 | Not Available | Positive | 1717916 - 1718299 | 14700.8 |
| oxygen-insensitive nad(p)h nitroreductase | C5715_09125 | Not Available | Positive | 1718378 - 1719031 | 23878.4 |
| mechanosensitive ion channel family protein | C5715_09130 | Not Available | Positive | 1719139 - 1720386 | 46639.6 |
| aromatic amino acid transporter arop | C5715_09135 | Not Available | Negative | 1720467 - 1721843 | 50648.3 |
| cusa/czca family heavy metal efflux rnd transporter | C5715_09140 | Not Available | Negative | 1721945 - 1725088 | 114693.0 |
| efflux rnd transporter periplasmic adaptor subunit | C5715_09145 | Not Available | Negative | 1725100 - 1726323 | 44353.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





