Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copc domain-containing protein yoba | C5715_08840 | Not Available | Negative | 1670067 - 1670441 | 13379.9 |
| dna polymerase iii subunit theta | C5715_08845 | Not Available | Positive | 1670580 - 1670810 | 8846.79 |
| carbon-nitrogen hydrolase family protein | C5715_08850 | Not Available | Positive | 1670912 - 1671568 | 24399.4 |
| dna polymerase iii subunit epsilon | C5715_08855 | Not Available | Positive | 1671592 - 1672254 | 25134.5 |
| oligopeptidase b | C5715_08860 | Not Available | Negative | 1672251 - 1674311 | 79450.6 |
| is200/is605 family transposase isec46 | C5715_08870 | Not Available | Negative | 1674468 - 1674893 | 15976.4 |
| transposase | C5715_08875 | Not Available | Positive | 1674950 - 1676119 | 43470.2 |
| duf533 domain-containing protein | C5715_08880 | Not Available | Negative | 1676283 - 1676942 | 23760.2 |
| protein yebf | C5715_08885 | Not Available | Negative | 1677269 - 1677625 | 12946.4 |
| damage-inducible protein yebg | C5715_08890 | Not Available | Negative | 1677692 - 1677982 | 10717.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





