Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5715_08145 | Not Available | Positive | 1538336 - 1538677 | 12539.0 |
| hypothetical protein | C5715_08150 | Not Available | Positive | 1538722 - 1539159 | 16123.6 |
| o-acetyltransferase | C5715_08155 | Not Available | Negative | 1539201 - 1540196 | 37622.2 |
| hypothetical protein | C5715_08160 | Not Available | Positive | 1540371 - 1540679 | 11622.3 |
| glycine--trna ligase subunit alpha | C5715_08165 | Not Available | Positive | 1540774 - 1541685 | 34718.2 |
| glycine--trna ligase subunit beta | C5715_08170 | Not Available | Positive | 1541695 - 1543764 | 76829.2 |
| type i toxin-antitoxin system hok family toxin | C5715_08175 | Not Available | Positive | 1544026 - 1544238 | 8172.32 |
| cold-shock protein | C5715_08180 | Not Available | Negative | 1544426 - 1544638 | 7403.66 |
| transcriptional regulator | C5715_08185 | Not Available | Negative | 1544919 - 1545209 | 11033.5 |
| duf3053 domain-containing protein | C5715_08190 | Not Available | Positive | 1545643 - 1546353 | 25664.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





