Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna guanosine(34) transglycosylase tgt | C5715_07470 | Not Available | Positive | 1403197 - 1404324 | 42596.1 |
| preprotein translocase subunit yajc | C5715_07475 | Not Available | Positive | 1404347 - 1404679 | 11948.0 |
| protein translocase subunit secd | C5715_07480 | Not Available | Positive | 1404707 - 1406554 | 66636.3 |
| protein translocase subunit secf | C5715_07485 | Not Available | Positive | 1406565 - 1407536 | 35384.6 |
| hnh endonuclease | C5715_07490 | Not Available | Positive | 1407665 - 1408012 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | C5715_07495 | Not Available | Negative | 1408050 - 1408934 | 33590.6 |
| hypothetical protein | C5715_07500 | Not Available | Negative | 1409232 - 1409771 | 19591.6 |
| transcriptional regulator nrdr | C5715_07505 | Not Available | Positive | 1409922 - 1410371 | 17176.8 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C5715_07510 | Not Available | Positive | 1410375 - 1411478 | 40437.8 |
| 6,7-dimethyl-8-ribityllumazine synthase | C5715_07515 | Not Available | Positive | 1411567 - 1412037 | 16157.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





