Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | C5715_06505 | Not Available | Positive | 1199166 - 1199732 | 21041.1 |
| cyclic di-gmp phosphodiesterase | C5715_06510 | Not Available | Positive | 1199913 - 1201469 | 58561.4 |
| abc transporter substrate-binding protein | C5715_06515 | Not Available | Positive | 1201551 - 1203365 | 69709.7 |
| abc transporter permease | C5715_06520 | Not Available | Positive | 1203366 - 1204460 | 40362.6 |
| microcin abc transporter permease | C5715_06525 | Not Available | Positive | 1204460 - 1205485 | 38159.7 |
| microcin c abc transporter atp-binding protein yejf | C5715_06530 | Not Available | Positive | 1205487 - 1207076 | 58692.7 |
| hypothetical protein | C5715_06535 | Not Available | Negative | 1207080 - 1207424 | 12525.9 |
| bcr/cfla family drug resistance efflux transporter | C5715_06540 | Not Available | Negative | 1207757 - 1208947 | 43369.4 |
| 16s rrna pseudouridine(516) synthase rsua | C5715_06545 | Not Available | Negative | 1208975 - 1209670 | 25880.8 |
| atp-dependent helicase | C5715_06555 | Not Available | Positive | 1209820 - 1211580 | 66460.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





