Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin-disulfide reductase | C5715_04305 | Not Available | Positive | 746267 - 747232 | 34585.1 |
| thiol reductant abc exporter subunit cydd | C5715_04310 | Not Available | Positive | 747355 - 749121 | 65068.0 |
| cysteine/glutathione abc transporter atp-binding protein/permease cydc | C5715_04315 | Not Available | Positive | 749122 - 750843 | 62918.1 |
| leucyl/phenylalanyl-trna--protein transferase | C5715_04320 | Not Available | Positive | 750885 - 751589 | 26620.0 |
| translation initiation factor if-1 | C5715_04325 | Not Available | Positive | 751874 - 752092 | 8250.1 |
| Trna-ser | Not Available | Not Available | Positive | 752346 - 752433 | Not Available |
| hypothetical protein | C5715_04335 | Not Available | Positive | 752497 - 752721 | 8389.94 |
| atp-dependent clp protease atp-binding subunit clpa | C5715_04340 | Not Available | Negative | 752957 - 755233 | 84211.9 |
| atp-dependent clp protease adaptor clps | C5715_04345 | Not Available | Negative | 755264 - 755584 | 12179.7 |
| cold-shock protein cspd | C5715_04350 | Not Available | Positive | 755907 - 756131 | 7969.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





