Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain NCDC 62-57 NalR-Br23R2 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1391279 bp
Thymine Count
1390623 bp
Guanine Count
1391996 bp
Cytosine Count
1434516 bp
Genome Length
5608414 bp
Protein-coding Genes
5345 genes
Non-Coding Genes
502 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylate kinase | C5715_04195 | Not Available | Negative | 717878 - 718561 | 24747.8 |
| metalloprotease | C5715_04200 | Not Available | Negative | 718734 - 719498 | 26778.7 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | C5715_04205 | Not Available | Negative | 719668 - 720951 | 46166.6 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | C5715_04210 | Not Available | Negative | 721022 - 722110 | 39826.6 |
| duf421 domain-containing protein | C5715_04215 | Not Available | Negative | 722309 - 723001 | 26269.4 |
| 30s ribosomal protein s12 methylthiotransferase accessory protein ycao | C5715_04220 | Not Available | Positive | 723131 - 724891 | 65610.9 |
| formate transporter foca | C5715_04225 | Not Available | Positive | 725297 - 726154 | 30992.6 |
| formate c-acetyltransferase | C5715_04230 | Not Available | Positive | 726209 - 728491 | 85305.0 |
| pyruvate formate lyase-activating protein | C5715_04235 | Not Available | Positive | 728683 - 729423 | 28205.9 |
| amino acid permease | C5715_04245 | Not Available | Negative | 729633 - 731063 | 52469.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





