Burkholderia cepacia strain Y14-15

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia strain Y14-15 is a Gram-negative bacterium primarily found in the rhizosphere, where it interacts with plant roots. This strain is classified as a microaerophile, indicating that it requires low levels of oxygen for optimal growth. Notably, it possesses a single replicon, which is characteristic of its genetic organization. This bacterium has a range of hosts, including Homo sapiens (humans), Viridiplantae (plants), Anura (frogs), and specifically, Allium cepa (onion). In humans, B. cepacia strain Y14-15 can lead to serious health effects, including pneumonia and infective endocarditis, particularly native valve endocarditis. These associations highlight its potential pathogenicity in clinical settings, especially among immunocompromised individuals. The ecological role of Burkholderia cepacia strain Y14-15 in the rhizosphere suggests a complex interaction with plant health and soil dynamics. Given its ability to thrive in microaerophilic conditions, it may contribute to nutrient cycling or influence the microbial community structure in its habitat. Understanding the dual role of this strain, both as a potential pathogen and a component of the soil microbiome, underscores the importance of studying its interactions within ecological systems and its implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
Strainstrain Y14-15

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia strain Y14-15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Anura
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia strain Y14-15 Scaffold229_1, whole genome

Gene Summary

Adenine Count

1393244 bp

Thymine Count

1393984 bp

Guanine Count

2722320 bp

Cytosine Count

2723439 bp

Genome Length

8232987 bp

Protein-coding Genes

7078 genes

Non-Coding Genes

337 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycosyl transferaseC5615_13790Not AvailablePositive2948851 - 295074368664.3
duf924 domain-containing proteinC5615_13795Not AvailableNegative2950938 - 295155522312.1
ala-trna(pro) hydrolaseC5615_13800Not AvailableNegative2951552 - 295228326536.8
cyanoglobinC5615_13805Not AvailableNegative2952389 - 295279915904.9
abc transporter permeaseC5615_13810Not AvailableNegative2952843 - 295540490026.3
duf4126 domain-containing proteinC5615_13815Not AvailableNegative2955455 - 295607220977.9
quaternary ammonium compound-resistance protein sugeC5615_13820Not AvailableNegative2956314 - 295663410654.5
duf333 domain-containing proteinC5615_13825Not AvailableNegative2956800 - 29570819772.01
two-component system response regulator kdpeC5615_13830Not AvailableNegative2957240 - 295793826100.3
two-component system sensor histidine kinase kdbdC5615_13835Not AvailableNegative2957931 - 2960774103617.0

Displaying genes 2891 – 2900 of 7415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infective endocarditisCausesPMC3112426
Native valve endocarditisCausesPMC3112426
PneumoniaCausesPMC9294674

Displaying health effects 1 – 3 of 3 in total