Burkholderia cepacia strain Y14-15

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia strain Y14-15 is a Gram-negative bacterium primarily found in the rhizosphere, where it interacts with plant roots. This strain is classified as a microaerophile, indicating that it requires low levels of oxygen for optimal growth. Notably, it possesses a single replicon, which is characteristic of its genetic organization. This bacterium has a range of hosts, including Homo sapiens (humans), Viridiplantae (plants), Anura (frogs), and specifically, Allium cepa (onion). In humans, B. cepacia strain Y14-15 can lead to serious health effects, including pneumonia and infective endocarditis, particularly native valve endocarditis. These associations highlight its potential pathogenicity in clinical settings, especially among immunocompromised individuals. The ecological role of Burkholderia cepacia strain Y14-15 in the rhizosphere suggests a complex interaction with plant health and soil dynamics. Given its ability to thrive in microaerophilic conditions, it may contribute to nutrient cycling or influence the microbial community structure in its habitat. Understanding the dual role of this strain, both as a potential pathogen and a component of the soil microbiome, underscores the importance of studying its interactions within ecological systems and its implications for human health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
Strainstrain Y14-15

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia strain Y14-15
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Anura
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia strain Y14-15 Scaffold229_1, whole genome

Gene Summary

Adenine Count

1393244 bp

Thymine Count

1393984 bp

Guanine Count

2722320 bp

Cytosine Count

2723439 bp

Genome Length

8232987 bp

Protein-coding Genes

7078 genes

Non-Coding Genes

337 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf899 domain-containing proteinC5615_09330Not AvailablePositive1981239 - 198200328771.6
hypothetical proteinC5615_09335Not AvailablePositive1982037 - 198284027077.7
imp dehydrogenaseC5615_09340Not AvailablePositive1983119 - 198457951944.9
hypothetical proteinC5615_09345Not AvailablePositive1984586 - 198518820393.0
gmp synthase (glutamine-hydrolyzing)C5615_09350Not AvailablePositive1985296 - 198691559449.5
ligaseC5615_09355Not AvailablePositive1987051 - 198766822657.5
helicaseC5615_09360Not AvailablePositive1987981 - 1990683101368.0
dna polymerase iii subunit epsilonC5615_09365Not AvailableNegative1991084 - 199170122638.5
2'-5' rna ligaseC5615_09370Not AvailablePositive1992044 - 199264022000.6
hypothetical proteinC5615_09375Not AvailableNegative1993009 - 199335012334.9

Displaying genes 2081 – 2090 of 7415 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infective endocarditisCausesPMC3112426
Native valve endocarditisCausesPMC3112426
PneumoniaCausesPMC9294674

Displaying health effects 1 – 3 of 3 in total