Amnimonas aquatica strain HR-E HR-E_386

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Amnimonas

Description

Amnimonas aquatica strain HR-E (accession PTQZ00000000.1) is characterized by a single replicon, indicating a streamlined genomic organization. This trait often suggests a potential adaptation to specific ecological niches or environments, enabling efficient replication and resource utilization. The presence of only one replicon is a notable feature in microbial genomics, as it can influence various biological processes such as gene expression and metabolic pathways. Strains with a reduced number of replicons may exhibit faster growth rates under certain conditions, which can be advantageous in competitive environments. Understanding the genomic structure of Amnimonas aquatica strain HR-E provides insights into its ecological role. This organism may play a significant part in aquatic ecosystems, contributing to nutrient cycling and potentially influencing microbial community dynamics. The streamlined genomic configuration could also suggest a specialization that allows it to thrive in particular aquatic environments. In conclusion, the single replicon of Amnimonas aquatica strain HR-E highlights its potential for specialized adaptation and efficiency in resource utilization within its ecological niche, underscoring its role in aquatic microbiomes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusAmnimonas
SpeciesAmnimonas aquatica
Strainstrain HR-E HR-E_386

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amnimonas aquatica strain HR-E HR-E_386, whole genome shotgun

Gene Summary

Adenine Count

301052 bp

Thymine Count

302613 bp

Guanine Count

635426 bp

Cytosine Count

635070 bp

Genome Length

1874290 bp

Protein-coding Genes

1916 genes

Non-Coding Genes

52 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
branched chain amino acid abc transporter substrate-binding proteinC5O18_00800Not AvailableNegative156730 - 15791442242.6
succinyl-diaminopimelate desuccinylaseC5O18_00805Not AvailablePositive158114 - 15925941426.0
rna polymerase sigma factor rposC5O18_00810Not AvailablePositive159371 - 16027334416.9
Trna-argNot AvailableNot AvailablePositive160366 - 160442Not Available
protein-l-isoaspartate o-methyltransferaseC5O18_00820Not AvailableNegative160466 - 16114024111.4
5'/3'-nucleotidase sureC5O18_00825Not AvailableNegative161268 - 16203827266.6
trna pseudouridine(13) synthase trudC5O18_00830Not AvailableNegative162016 - 16251917265.4
elongation factor tuC5O18_00835Not AvailablePositive162520 - 1625932345.93
30s ribosomal protein s10C5O18_00840Not AvailablePositive162839 - 16315011603.2
50s ribosomal protein l3C5O18_00845Not AvailablePositive163203 - 16384122261.8

Displaying genes 161 – 170 of 1968 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.