Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which contributes to its motility. The bacterium contains a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The accession number for this strain is PTQY00000000.1, which serves as a reference for genomic data and further studies. The characteristics of Rhodoferax sp. align with other members of the genus, which are known for their versatility in various environments, including aquatic systems and soil. The presence of flagella suggests that Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14 may play a significant role in its ecological niche, likely influencing its ability to colonize different substrates or environments. The motility conferred by flagella can enhance the bacterium's ability to seek out nutrients or evade unfavorable conditions. In summary, the traits of Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14 highlight its potential adaptability and ecological significance, underscoring the importance of motility in its survival and functionality within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax sp. TS-BS-61-7
StrainTS-BS-61-7-C14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14, whole genome shotgun

Gene Summary

Adenine Count

801760 bp

Thymine Count

793611 bp

Guanine Count

1287114 bp

Cytosine Count

1310004 bp

Genome Length

4192489 bp

Protein-coding Genes

3889 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ygiq family radical sam proteinC5F53_19225Not AvailableNegative4023309 - 402573889075.7
abc transporter substrate-binding proteinC5F53_19230Not AvailablePositive4026008 - 402685030235.2
arginine abc transporter permease artqC5F53_19235Not AvailablePositive4026918 - 402760424367.6
amino acid abc transporter permeaseC5F53_19240Not AvailablePositive4027601 - 402831426498.6
succinylglutamate desuccinylaseC5F53_19245Not AvailablePositive4028321 - 402945140340.3
histidine/lysine/arginine/ornithine abc transporter atp-binding proteinC5F53_19250Not AvailablePositive4029494 - 403027028373.6
hypothetical proteinC5F53_19255Not AvailablePositive4030288 - 403233376305.7
acyltransferaseC5F53_19260Not AvailablePositive4032341 - 403327034946.1
eama family transporterC5F53_19265Not AvailablePositive4033257 - 403421333807.4
flagellar motor protein motbC5F53_19270Not AvailableNegative4034268 - 403517932463.0

Displaying genes 3821 – 3830 of 3977 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.