Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which contributes to its motility. The bacterium contains a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The accession number for this strain is PTQY00000000.1, which serves as a reference for genomic data and further studies. The characteristics of Rhodoferax sp. align with other members of the genus, which are known for their versatility in various environments, including aquatic systems and soil. The presence of flagella suggests that Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14 may play a significant role in its ecological niche, likely influencing its ability to colonize different substrates or environments. The motility conferred by flagella can enhance the bacterium's ability to seek out nutrients or evade unfavorable conditions. In summary, the traits of Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14 highlight its potential adaptability and ecological significance, underscoring the importance of motility in its survival and functionality within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax sp. TS-BS-61-7
StrainTS-BS-61-7-C14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14, whole genome shotgun

Gene Summary

Adenine Count

801760 bp

Thymine Count

793611 bp

Guanine Count

1287114 bp

Cytosine Count

1310004 bp

Genome Length

4192489 bp

Protein-coding Genes

3889 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (cytosine(1402)-n(4))-methyltransferaseC5F53_14440Not AvailablePositive3021634 - 302256934008.3
cell division protein ftslC5F53_14445Not AvailablePositive3022566 - 302284710579.0
cell division proteinC5F53_14450Not AvailablePositive3022844 - 302457762967.0
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseC5F53_14455Not AvailablePositive3024577 - 302607352038.1
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseC5F53_14460Not AvailablePositive3026079 - 302749449070.7
phospho-n-acetylmuramoyl-pentapeptide- transferaseC5F53_14465Not AvailablePositive3027513 - 302869143135.1
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseC5F53_14470Not AvailablePositive3028688 - 303063167428.3
putative lipid ii flippase ftswC5F53_14475Not AvailablePositive3030628 - 303188445765.6
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseC5F53_14480Not AvailablePositive3031881 - 303294537303.9
udp-n-acetylmuramate--l-alanine ligaseC5F53_14485Not AvailablePositive3032942 - 303436949937.3

Displaying genes 2871 – 2880 of 3977 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.