Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which contributes to its motility. The bacterium contains a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The accession number for this strain is PTQY00000000.1, which serves as a reference for genomic data and further studies. The characteristics of Rhodoferax sp. align with other members of the genus, which are known for their versatility in various environments, including aquatic systems and soil. The presence of flagella suggests that Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14 may play a significant role in its ecological niche, likely influencing its ability to colonize different substrates or environments. The motility conferred by flagella can enhance the bacterium's ability to seek out nutrients or evade unfavorable conditions. In summary, the traits of Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14 highlight its potential adaptability and ecological significance, underscoring the importance of motility in its survival and functionality within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax sp. TS-BS-61-7
StrainTS-BS-61-7-C14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14, whole genome shotgun

Gene Summary

Adenine Count

801760 bp

Thymine Count

793611 bp

Guanine Count

1287114 bp

Cytosine Count

1310004 bp

Genome Length

4192489 bp

Protein-coding Genes

3889 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
f0f1 atp synthase subunit aC5F53_12325Not AvailableNegative2591879 - 259275732009.7
atp synthase subunit iC5F53_12330Not AvailableNegative2592771 - 259327117820.9
duf493 domain-containing proteinC5F53_12335Not AvailablePositive2593431 - 259370910100.2
lipoyl(octanoyl) transferaseC5F53_12340Not AvailablePositive2593734 - 259441724315.1
lipoyl synthaseC5F53_12345Not AvailablePositive2594481 - 259545536255.8
hypothetical proteinC5F53_12350Not AvailableNegative2595525 - 259600117308.2
sarcosine oxidase subunit betaC5F53_12355Not AvailablePositive2596207 - 259746645295.0
sarcosine oxidase subunit deltaC5F53_12360Not AvailablePositive2597481 - 259778911900.0
sarcosine oxidase subunit alphaC5F53_12365Not AvailablePositive2597786 - 2600788107710.0
sarcosine oxidase subunit gammaC5F53_12370Not AvailablePositive2600781 - 260142222883.9

Displaying genes 2451 – 2460 of 3977 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.