Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Rhodoferax

Description

Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14 is a Gram-negative bacterium characterized by its rod-shaped morphology and the presence of flagella, which contributes to its motility. The bacterium contains a single replicon, indicating a streamlined genetic structure that may facilitate efficient replication and adaptation. The accession number for this strain is PTQY00000000.1, which serves as a reference for genomic data and further studies. The characteristics of Rhodoferax sp. align with other members of the genus, which are known for their versatility in various environments, including aquatic systems and soil. The presence of flagella suggests that Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14 may play a significant role in its ecological niche, likely influencing its ability to colonize different substrates or environments. The motility conferred by flagella can enhance the bacterium's ability to seek out nutrients or evade unfavorable conditions. In summary, the traits of Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14 highlight its potential adaptability and ecological significance, underscoring the importance of motility in its survival and functionality within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusRhodoferax
SpeciesRhodoferax sp. TS-BS-61-7
StrainTS-BS-61-7-C14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoferax sp. TS-BS-61-7 TS-BS-61-7-C14, whole genome shotgun

Gene Summary

Adenine Count

801760 bp

Thymine Count

793611 bp

Guanine Count

1287114 bp

Cytosine Count

1310004 bp

Genome Length

4192489 bp

Protein-coding Genes

3889 genes

Non-Coding Genes

88 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate-binding proteinC5F53_09325Not AvailableNegative1970975 - 197149017455.6
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomeraseC5F53_09330Not AvailableNegative1971618 - 197306351900.3
mannose-1-phosphate guanyltransferaseC5F53_09335Not AvailableNegative1973093 - 197419640877.4
udp-glucose 4-epimerase galeC5F53_09340Not AvailableNegative1974197 - 197521336708.6
transcriptional regulator epsaC5F53_09345Not AvailablePositive1975587 - 197638429614.3
undecaprenyl-phosphate glucose phosphotransferaseC5F53_09350Not AvailablePositive1976377 - 197779852272.4
putative exosortase b-associated extracellular polysaccharide biosynthesis transporter epslC5F53_09355Not AvailablePositive1977801 - 197899743409.0
peptidyl-prolyl cis-trans isomerase, epsd familyC5F53_09360Not AvailablePositive1979012 - 197995632848.4
polysaccharide export protein epseC5F53_09365Not AvailablePositive1979981 - 198078728855.8
chain length determinant protein epsfC5F53_09370Not AvailablePositive1980802 - 198217849844.8

Displaying genes 1861 – 1870 of 3977 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.