Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cold-shock protein cspe | C5P44_03110 | Not Available | Negative | 604137 - 604346 | 7463.84 |
| phospholipid:lipid a palmitoyltransferase | C5P44_03115 | Not Available | Negative | 604521 - 605081 | 21800.6 |
| hypothetical protein | C5P44_03120 | Not Available | Positive | 605334 - 605531 | 7827.57 |
| c4-dicarboxylate abc transporter | C5P44_03125 | Not Available | Positive | 605567 - 605686 | 4588.73 |
| anaerobic c4-dicarboxylate transporter dcuc | C5P44_03130 | Not Available | Positive | 605670 - 607055 | 48442.3 |
| response regulator | C5P44_03135 | Not Available | Negative | 607096 - 607776 | 25454.9 |
| ghkl domain-containing protein | C5P44_03140 | Not Available | Negative | 607745 - 609403 | 61647.7 |
| [citrate (pro-3s)-lyase] ligase | C5P44_03145 | Not Available | Positive | 609783 - 610841 | 40079.5 |
| citrate lyase acp | C5P44_03150 | Not Available | Positive | 610856 - 611152 | 10689.9 |
| citrate lyase subunit beta | C5P44_03155 | Not Available | Positive | 611149 - 612057 | 33141.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





