Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | C5P44_03060 | Not Available | Positive | 597672 - 598883 | 44446.5 |
| hypothetical protein | C5P44_03065 | Not Available | Positive | 598994 - 599257 | 9827.92 |
| octanoyltransferase | C5P44_03070 | Not Available | Positive | 599358 - 599999 | 23884.0 |
| hypothetical protein | C5P44_03075 | Not Available | Negative | 600051 - 600200 | 5685.03 |
| lysr family transcriptional regulator | C5P44_03080 | Not Available | Positive | 600259 - 601212 | 35877.4 |
| dna-binding protein | C5P44_03085 | Not Available | Positive | 601209 - 601322 | 4359.19 |
| lipoyl synthase | C5P44_03090 | Not Available | Positive | 601421 - 602386 | 36101.9 |
| twin-arginine translocase subunit tata | C5P44_03095 | Not Available | Negative | 602487 - 602690 | 7024.71 |
| hydrolase | C5P44_03100 | Not Available | Negative | 602819 - 603607 | 28691.0 |
| fluoride efflux transporter crcb | C5P44_03105 | Not Available | Positive | 603700 - 604083 | 13766.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





