Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P44_02655 | Not Available | Positive | 518804 - 519043 | 8730.59 |
| hypothetical protein | C5P44_02660 | Not Available | Negative | 519307 - 519492 | 6817.23 |
| citrate (si)-synthase | C5P44_02665 | Not Available | Positive | 519480 - 520763 | 47984.6 |
| type 1 fimbrial protein | C5P44_02670 | Not Available | Positive | 521150 - 521716 | 19974.6 |
| fimbrial biogenesis outer membrane usher protein | C5P44_02675 | Not Available | Positive | 521775 - 524225 | 90100.3 |
| molecular chaperone | C5P44_02680 | Not Available | Positive | 524240 - 524971 | 27502.2 |
| hypothetical protein | C5P44_02685 | Not Available | Positive | 524968 - 526029 | 39664.9 |
| abrb family transcriptional regulator | C5P44_02690 | Not Available | Positive | 526178 - 527224 | 36932.2 |
| endonuclease viii | C5P44_02695 | Not Available | Negative | 527221 - 528012 | 29842.8 |
| lamb/ycsf family protein | C5P44_02700 | Not Available | Negative | 528048 - 528782 | 25862.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





