Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1471 domain-containing protein | C5P44_02140 | Not Available | Positive | 420779 - 421183 | 14655.7 |
| catecholate siderophore receptor fiu | C5P44_02145 | Not Available | Positive | 421448 - 423730 | 81932.4 |
| fe2+-dependent dioxygenase | C5P44_02150 | Not Available | Positive | 423772 - 424449 | 25499.3 |
| dksa/trar family c4-type zinc finger protein | C5P44_02155 | Not Available | Positive | 424523 - 424789 | 9804.42 |
| duf1471 domain-containing protein | C5P44_02160 | Not Available | Positive | 425054 - 425314 | 8568.2 |
| dehydrogenase | C5P44_02165 | Not Available | Negative | 425632 - 426717 | 38886.3 |
| dna-binding protein ybib | C5P44_02170 | Not Available | Negative | 426858 - 427820 | 35012.6 |
| atp-dependent dna helicase ding | C5P44_02175 | Not Available | Negative | 427848 - 429998 | 81493.0 |
| type iii effector | C5P44_02185 | Not Available | Negative | 430282 - 432294 | 76793.2 |
| hypothetical protein | C5P44_02190 | Not Available | Positive | 432599 - 433201 | 23701.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





