Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biofilm regulator bssr | C5P44_01980 | Not Available | Negative | 384351 - 384734 | 14536.6 |
| 30s ribosomal protein s12 methylthiotransferase rimo | C5P44_01985 | Not Available | Positive | 384947 - 386272 | 49584.6 |
| ggdef domain-containing protein | C5P44_01990 | Not Available | Negative | 386319 - 387647 | 49893.8 |
| c-di-gmp phosphodiesterase | C5P44_01995 | Not Available | Negative | 387655 - 389952 | 88133.0 |
| glutathione abc transporter permease | C5P44_02000 | Not Available | Negative | 390180 - 391091 | 33254.3 |
| glutathione abc transporter permease | C5P44_02005 | Not Available | Negative | 391094 - 392014 | 34068.5 |
| glutathione abc transporter substrate-binding protein gsib | C5P44_02010 | Not Available | Negative | 392032 - 393570 | 56504.1 |
| glutathione abc transporter atp-binding protein gsia | C5P44_02015 | Not Available | Negative | 393590 - 395461 | 69192.4 |
| beta-aspartyl-peptidase | C5P44_02020 | Not Available | Negative | 395448 - 396356 | 31633.8 |
| molybdopterin molybdotransferase | C5P44_02025 | Not Available | Positive | 396617 - 397852 | 43986.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





