Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase family protein | C5P44_01410 | Not Available | Positive | 264383 - 265309 | 34123.6 |
| duf2623 domain-containing protein | C5P44_01415 | Not Available | Positive | 265428 - 265715 | 10946.1 |
| hypothetical protein | C5P44_01420 | Not Available | Positive | 265712 - 265897 | 6965.43 |
| hydrogenase-2 small chain | C5P44_01425 | Not Available | Positive | 265904 - 267022 | 39654.3 |
| hydrogenase-2 operon protein hyba | C5P44_01430 | Not Available | Positive | 267025 - 268011 | 36005.0 |
| ni/fe-hydrogenase cytochrome b subunit | C5P44_01435 | Not Available | Positive | 268001 - 269179 | 43632.7 |
| hydrogenase 2 large subunit | C5P44_01440 | Not Available | Positive | 269176 - 270879 | 62478.6 |
| hyad/hybd family hydrogenase maturation endopeptidase | C5P44_01445 | Not Available | Positive | 270879 - 271373 | 17724.8 |
| hydrogenase-2 operon protein hybe | C5P44_01450 | Not Available | Positive | 271366 - 271854 | 17964.7 |
| hydrogenase nickel incorporation protein | C5P44_01455 | Not Available | Positive | 271847 - 272188 | 12698.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





