Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-ribose diphosphatase | C5P44_01260 | Not Available | Positive | 235370 - 235999 | 23668.2 |
| dehydrogenase | C5P44_01265 | Not Available | Positive | 236000 - 236422 | 16549.0 |
| phosphodiesterase | C5P44_01270 | Not Available | Positive | 236447 - 237274 | 30939.7 |
| esterase yqia | C5P44_01275 | Not Available | Positive | 237274 - 237855 | 21642.7 |
| dna topoisomerase iv subunit b | C5P44_01280 | Not Available | Positive | 237884 - 239776 | 70247.9 |
| quinol monooxygenase ygin | C5P44_01285 | Not Available | Negative | 239824 - 240138 | 11547.1 |
| modulator of drug activity b | C5P44_01290 | Not Available | Negative | 240169 - 240750 | 21862.1 |
| duf2645 domain-containing protein | C5P44_01295 | Not Available | Positive | 241108 - 241440 | 13253.6 |
| two-component sensor histidine kinase | C5P44_01300 | Not Available | Negative | 241486 - 242835 | 50275.8 |
| two-component system response regulator qseb | C5P44_01305 | Not Available | Negative | 242832 - 243491 | 24747.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





