Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | C5P44_01060 | Not Available | Positive | 200769 - 202289 | 55116.1 |
| padr family transcriptional regulator | C5P44_01065 | Not Available | Negative | 202443 - 203066 | 23416.7 |
| siderophore-interacting protein | C5P44_01070 | Not Available | Positive | 203354 - 204118 | 28956.1 |
| Trna-met | Not Available | Not Available | Positive | 204171 - 204246 | Not Available |
| mismatch-specific dna-glycosylase | C5P44_01080 | Not Available | Positive | 204371 - 204877 | 18674.5 |
| rna polymerase sigma factor rpod | C5P44_01085 | Not Available | Negative | 204956 - 206797 | 70211.2 |
| rna polymerase subunit sigma | C5P44_01090 | Not Available | Negative | 206856 - 206978 | 4564.46 |
| dna primase | C5P44_01095 | Not Available | Negative | 206992 - 208737 | 65549.4 |
| 30s ribosomal protein s21 | C5P44_01100 | Not Available | Negative | 208848 - 209063 | 8500.42 |
| hypothetical protein | C5P44_01105 | Not Available | Positive | 209062 - 209292 | 8737.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





