Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| altronate dehydratase | C5P44_00945 | Not Available | Positive | 174995 - 176482 | 54180.3 |
| ygjv family protein | C5P44_00950 | Not Available | Positive | 176565 - 177116 | 20590.8 |
| serine/threonine transporter sstt | C5P44_00955 | Not Available | Negative | 177121 - 178365 | 43480.4 |
| terc family protein | C5P44_00965 | Not Available | Negative | 178910 - 179875 | 35983.1 |
| gfo/idh/moca family oxidoreductase | C5P44_00970 | Not Available | Negative | 180159 - 181145 | 36231.2 |
| vancomycin high temperature exclusion protein | C5P44_00975 | Not Available | Negative | 181224 - 181916 | 25631.5 |
| m48 family peptidase | C5P44_00980 | Not Available | Negative | 181993 - 182496 | 19456.6 |
| ribosomal rna large subunit methyltransferase g | C5P44_00985 | Not Available | Positive | 182581 - 183717 | 42302.8 |
| type ii toxin-antitoxin system higa family antitoxin | C5P44_00995 | Not Available | Positive | 183987 - 184403 | 15038.4 |
| nadph-dependent 2,4-dienoyl-coa reductase | C5P44_01000 | Not Available | Negative | 184448 - 186466 | 72641.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





