Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Xre family transcriptional regulator | C5P44_10100 | Not Available | Positive | 2006049 - 2006348 | 11047.1 |
| Integrase | C5P44_10105 | Not Available | Positive | 2006464 - 2007477 | 38304.2 |
| Attr | Not Available | Not Available | Positive | 2007557 - 2007575 | Not Available |
| hypothetical protein | C5P44_10110 | Not Available | Negative | 2007625 - 2007756 | 4862.05 |
| hypothetical protein | C5P44_10115 | Not Available | Negative | 2007932 - 2008249 | 11343.7 |
| lipid kinase yegs | C5P44_10120 | Not Available | Positive | 2008733 - 2009632 | 31977.5 |
| Putative deor transcriptional regulator ygbi | C5P44_10125 | Not Available | Negative | 2009714 - 2010493 | 27960.9 |
| Transposase insh, is5d, is5 family | C5P44_13350 | Not Available | Positive | 2655220 - 2655350 | 5076.23 |
| abc transporter | C5P44_13355 | Not Available | Negative | 2655389 - 2655475 | 3138.69 |
| hypothetical | C5P44_13360 | Not Available | Positive | 2655500 - 2656453 | 36319.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





