Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reactive intermediate/imine deaminase | C5P44_00835 | Not Available | Positive | 158142 - 158531 | 14008.0 |
| l-serine ammonia-lyase | C5P44_00840 | Not Available | Positive | 158603 - 159967 | 48543.6 |
| transporter | C5P44_00850 | Not Available | Positive | 160241 - 161572 | 48317.6 |
| serine dehydratase subunit alpha family protein | C5P44_00855 | Not Available | Positive | 161600 - 162910 | 45332.8 |
| hypothetical protein | C5P44_00860 | Not Available | Negative | 163044 - 163208 | 5907.01 |
| pirin-like protein yhak | C5P44_00865 | Not Available | Negative | 163231 - 163932 | 25897.0 |
| lysr family transcriptional regulator | C5P44_00870 | Not Available | Positive | 164037 - 164933 | 33231.3 |
| duf805 domain-containing protein | C5P44_00880 | Not Available | Negative | 164984 - 165340 | 13456.7 |
| duf805 domain-containing protein | C5P44_00885 | Not Available | Negative | 165582 - 165947 | 14281.7 |
| glutathione s-transferase family protein | C5P44_00890 | Not Available | Negative | 166230 - 167216 | 37468.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





