Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr02099 family protein | C5P44_00165 | Not Available | Positive | 27479 - 31279 | 139077.0 |
| metalloprotease tldd | C5P44_00170 | Not Available | Positive | 31435 - 32880 | 51367.2 |
| hth-type transcriptional activator aaer | C5P44_00175 | Not Available | Negative | 33014 - 33943 | 34518.1 |
| protein aaex | C5P44_00180 | Not Available | Positive | 34126 - 34329 | 7847.01 |
| p-hydroxybenzoic acid efflux pump subunit aaea | C5P44_00185 | Not Available | Positive | 34337 - 35269 | 34762.5 |
| p-hydroxybenzoic acid efflux pump subunit aaeb | C5P44_00190 | Not Available | Positive | 35275 - 37242 | 73614.9 |
| Ncrna_class:other | Not Available | Not Available | Positive | 36151 - 36282 | Not Available |
| hypothetical protein | C5P44_00195 | Not Available | Positive | 37334 - 37606 | 10796.7 |
| duf1471 domain-containing protein | C5P44_00200 | Not Available | Negative | 37669 - 37932 | 9196.89 |
| arginine repressor | C5P44_00205 | Not Available | Negative | 38297 - 38767 | 16995.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





