Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | C5P44_10000 | Not Available | Negative | 1991279 - 1991437 | 5625.46 |
| Lysb | C5P44_10005 | Not Available | Negative | 1991424 - 1991849 | 15768.9 |
| Holin | C5P44_10010 | Not Available | Negative | 1991837 - 1992262 | 15491.6 |
| Endolysin | C5P44_10015 | Not Available | Negative | 1992277 - 1992774 | 18539.1 |
| Holin | C5P44_10020 | Not Available | Negative | 1992774 - 1993055 | 9787.61 |
| Baseplate protein x | C5P44_10025 | Not Available | Negative | 1993059 - 1993262 | 7099.45 |
| Head completion/stabilization protein | C5P44_10030 | Not Available | Negative | 1993262 - 1993771 | 19132.9 |
| Terminase | C5P44_10035 | Not Available | Negative | 1993871 - 1994614 | 27455.6 |
| Capsid protein | C5P44_10040 | Not Available | Negative | 1994618 - 1995691 | 40256.8 |
| Capsid-scaffolding protein | C5P44_10045 | Not Available | Negative | 1995750 - 1996604 | 31433.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





