Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative small terminase subunit | C5P44_26175 | Not Available | Positive | 5042415 - 5042954 | 20114.0 |
| Putative large terminase subunit | C5P44_26180 | Not Available | Positive | 5042963 - 5044223 | 47318.1 |
| Tail:host specificity protein | C5P44_26300 | Not Available | Negative | 5063977 - 5064640 | 24055.5 |
| Putative tail component | C5P44_26305 | Not Available | Negative | 5064701 - 5065342 | 22551.6 |
| Tail fiber component | C5P44_26310 | Not Available | Negative | 5065240 - 5065983 | 28344.4 |
| Tail component | C5P44_26315 | Not Available | Negative | 5065988 - 5066686 | 25646.0 |
| Minor tail protein | C5P44_26320 | Not Available | Negative | 5066686 - 5067042 | 13732.2 |
| Putative tail component | C5P44_26325 | Not Available | Negative | 5067020 - 5070247 | 115494.0 |
| Phage tail protein | C5P44_26330 | Not Available | Negative | 5070294 - 5070554 | 9542.35 |
| Putative tail assembly chaperone | C5P44_26335 | Not Available | Negative | 5070596 - 5070982 | 14543.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





