Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail protein | C5P44_09950 | Not Available | Positive | 1985080 - 1985478 | 14302.1 |
| Tail fiber assembly protein | C5P44_09955 | Not Available | Positive | 1985481 - 1985921 | 16477.4 |
| Tail fiber assembly protein | C5P44_09960 | Not Available | Negative | 1985893 - 1986486 | 21532.9 |
| Tail fiber protein | C5P44_09965 | Not Available | Negative | 1986486 - 1987844 | 48528.0 |
| Tail fibers protein | C5P44_09970 | Not Available | Negative | 1987841 - 1988452 | 22534.8 |
| Baseplate assembly protein j | C5P44_09975 | Not Available | Negative | 1988445 - 1989353 | 32727.6 |
| Baseplate assembly protein w | C5P44_09980 | Not Available | Negative | 1989358 - 1989705 | 12708.4 |
| Baseplate protein | C5P44_09985 | Not Available | Negative | 1989702 - 1990337 | 22195.5 |
| Tail completion protein | C5P44_09990 | Not Available | Negative | 1990404 - 1990856 | 17257.9 |
| Tail completion protein | C5P44_09995 | Not Available | Negative | 1990849 - 1991316 | 17338.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





