Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative coat protein | C5P44_23665 | Not Available | Positive | 4638269 - 4639408 | 39426.8 |
| Putative head-tail joining protein | C5P44_23670 | Not Available | Positive | 4639631 - 4640026 | 13989.7 |
| Hypothetical protein | C5P44_23675 | Not Available | Positive | 4640026 - 4640409 | 14023.5 |
| Tail protein | C5P44_23680 | Not Available | Positive | 4640410 - 4640790 | 13642.2 |
| Putative tail terminator protein | C5P44_23685 | Not Available | Positive | 4640787 - 4641179 | 14345.3 |
| Putative major tail protein | C5P44_23690 | Not Available | Positive | 4641206 - 4642168 | 33677.1 |
| Hypothetical protein | C5P44_23695 | Not Available | Positive | 4642229 - 4642678 | 16867.3 |
| Putative tail assembly chaperone | C5P44_23700 | Not Available | Positive | 4642786 - 4642986 | 7612.19 |
| Bacteriophage tail tape measure protein | C5P44_23705 | Not Available | Positive | 4643150 - 4646383 | 117951.0 |
| Putative minor tail protein | C5P44_23710 | Not Available | Positive | 4646376 - 4646714 | 13256.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





