Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Conserved protein of unknown function uhr | C5P44_22720 | Not Available | Positive | 4466273 - 4466557 | 10783.0 |
| Recombination-associated protein rdgc | C5P44_22725 | Not Available | Positive | 4466550 - 4467455 | 33642.4 |
| Dna methyltransferase | C5P44_22730 | Not Available | Positive | 4467452 - 4469470 | 74574.6 |
| hypothetical protein | C5P44_22735 | Not Available | Positive | 4469780 - 4470022 | 8641.67 |
| Trna,type:asn,anti_codon:gtt; | Not Available | Not Available | Positive | 4470144 - 4470219 | Not Available |
| Trna,type:thr,anti_codon:tgt; | Not Available | Not Available | Positive | 4470222 - 4470297 | Not Available |
| Conserved protein of unknown function upl | C5P44_22750 | Not Available | Negative | 4470646 - 4470837 | 7035.67 |
| Hypothetical protein | C5P44_22755 | Not Available | Positive | 4471030 - 4471266 | 9043.51 |
| Putative serine protease | C5P44_22760 | Not Available | Positive | 4471247 - 4472074 | 30186.3 |
| Trna,type:met,anti_codon:cat; | Not Available | Not Available | Positive | 4472102 - 4472177 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





