Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine-binding periplasmic protein | C5P44_04770 | Not Available | Negative | 946349 - 947395 | 38855.0 |
| spermidine/putrescine abc transporter permease | C5P44_04775 | Not Available | Negative | 947392 - 948186 | 29112.7 |
| spermidine/putrescine abc transporter permease potb | C5P44_04780 | Not Available | Negative | 948183 - 949040 | 32210.3 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | C5P44_04785 | Not Available | Negative | 949024 - 950160 | 43030.8 |
| hypothetical protein | C5P44_04790 | Not Available | Negative | 950139 - 950354 | 8408.22 |
| peptidase t | C5P44_04795 | Not Available | Positive | 950410 - 951639 | 44946.0 |
| 50s ribosomal protein l16 arginine hydroxylase | C5P44_04800 | Not Available | Negative | 951785 - 952906 | 42567.2 |
| sensor protein phoq | C5P44_04805 | Not Available | Negative | 952982 - 954442 | 55302.8 |
| two-component system response regulator phop | C5P44_04810 | Not Available | Negative | 954442 - 955113 | 25536.7 |
| adenylosuccinate lyase | C5P44_04815 | Not Available | Negative | 955281 - 956651 | 51600.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





