Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma-28 factor flgm | C5P44_04515 | Not Available | Negative | 895670 - 895963 | 10341.1 |
| flagellar basal body p-ring formation protein flga | C5P44_04520 | Not Available | Negative | 896039 - 896698 | 23522.5 |
| flagellar biosynthesis protein flgb | C5P44_04525 | Not Available | Positive | 896853 - 897269 | 15241.1 |
| flagellar basal body rod protein flgc | C5P44_04530 | Not Available | Positive | 897273 - 897677 | 13968.8 |
| flagellar basal body rod modification protein flgd | C5P44_04535 | Not Available | Positive | 897689 - 898384 | 23576.4 |
| flagellar hook protein flge | C5P44_04540 | Not Available | Positive | 898409 - 899617 | 42046.5 |
| flagellar basal body rod protein flgf | C5P44_04545 | Not Available | Positive | 899637 - 900392 | 25968.8 |
| flagellar basal body rod protein flgg | C5P44_04550 | Not Available | Positive | 900564 - 901346 | 27759.6 |
| flagellar l-ring protein | C5P44_04555 | Not Available | Positive | 901399 - 902097 | 24616.9 |
| flagellar p-ring protein | C5P44_04560 | Not Available | Positive | 902109 - 903206 | 38171.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





