Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain JL_F20_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1363620 bp
Thymine Count
1365332 bp
Guanine Count
1392194 bp
Cytosine Count
1395992 bp
Genome Length
5517138 bp
Protein-coding Genes
5208 genes
Non-Coding Genes
362 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Prophage anti-repressor | C5P44_20175 | Not Available | Positive | 3962057 - 3962257 | 7448.79 |
| Dna binding transcriptional regulator | C5P44_20180 | Not Available | Positive | 3962295 - 3962852 | 20179.8 |
| Putative antirepressor | C5P44_20185 | Not Available | Positive | 3963028 - 3963207 | 7500.92 |
| O protein family protein | C5P44_20190 | Not Available | Positive | 3963197 - 3964138 | 34956.8 |
| Attr | Not Available | Not Available | Positive | 3963594 - 3963605 | Not Available |
| Perc transcriptional activator family protein | C5P44_20195 | Not Available | Positive | 3964135 - 3964471 | 12782.1 |
| Is186 transposase | C5P44_22650 | Not Available | Negative | 4453329 - 4453581 | 9186.0 |
| Putative baseplate structural protein | C5P44_22655 | Not Available | Negative | 4453741 - 4454250 | 18820.2 |
| Pmgg | C5P44_22660 | Not Available | Negative | 4454262 - 4454843 | 20628.6 |
| Tail tube protein | C5P44_22665 | Not Available | Negative | 4454879 - 4455694 | 29186.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





