Escherichia coli strain JL_F20_1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain JL_F20_1 is a Gram-negative, rod-shaped bacterium that typically occurs in pairs or as single cells. This strain thrives at an optimal temperature of 37.0°C, which aligns with the human body temperature, indicating its adaptation to a host-associated habitat. As a facultative anaerobe, strain JL_F20_1 has the metabolic flexibility to grow in both aerobic and anaerobic environments, allowing it to thrive in various niches within the host. This strain's Gram-negative classification suggests the presence of a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides, which can play a role in its interactions with the host's immune system. The rod shape and specific cell arrangement may facilitate motility and colonization within the host environment, enhancing its ability to occupy ecological niches. The association of Escherichia coli with host organisms highlights its potential role in the microbiota, where it may contribute to various physiological processes, including nutrient absorption and immune modulation. Understanding the traits of strain JL_F20_1 may provide insights into its specific ecological roles and interactions within the complex microbial communities associated with its host.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain JL_F20_1
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli strain JL_F20_1

Accession NumberPTOJ00000000.1

Gene Summary

Adenine Count

1363620 bp

Thymine Count

1365332 bp

Guanine Count

1392194 bp

Cytosine Count

1395992 bp

Genome Length

5517138 bp

Protein-coding Genes

5208 genes

Non-Coding Genes

362 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1977669 - 1977687Not Available
Putative positive regulator of late gene transcriptionC5P44_09905Not Available-1977797 - 19780519656.61
Tail proteinC5P44_09910Not Available-1978097 - 197926042751.9
Tail proteinC5P44_09915Not Available-1979260 - 197973917425.2
Tail length determinatorC5P44_09920Not Available-1979754 - 198220186531.7
Putative phage tail proteinC5P44_09925Not Available-1982194 - 19823134560.46
Tail proteinC5P44_09930Not Available-1982346 - 19826219664.92
Tail tube proteinC5P44_09935Not Available-1982678 - 198319619051.8
Phage tail sheath protein fiC5P44_09940Not Available-1983209 - 198439943079.9
Dna invertaseC5P44_09945Not Available-1984459 - 198505222143.9

Displaying genes 1 – 10 of 5570 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites