Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine abc transporter substrate-binding protein | C5P43_02970 | Not Available | Negative | 554061 - 555044 | 36164.2 |
| transcriptional regulator | C5P43_02975 | Not Available | Negative | 555208 - 556863 | 64007.7 |
| glucose uptake inhibitor sgrt | C5P43_02980 | Not Available | Positive | 556952 - 557083 | 5338.42 |
| mfs transporter | C5P43_02985 | Not Available | Positive | 557185 - 558363 | 42738.9 |
| 3-isopropylmalate dehydratase small subunit | C5P43_02990 | Not Available | Negative | 558412 - 559017 | 22488.7 |
| 3-isopropylmalate dehydratase large subunit | C5P43_02995 | Not Available | Negative | 559028 - 560428 | 49884.7 |
| 3-isopropylmalate dehydrogenase | C5P43_03000 | Not Available | Negative | 560431 - 561522 | 39519.3 |
| 2-isopropylmalate synthase | C5P43_03005 | Not Available | Negative | 561522 - 563093 | 57287.1 |
| leu operon leader peptide | C5P43_03010 | Not Available | Negative | 563186 - 563272 | 3146.0 |
| transcriptional regulator leuo | C5P43_03015 | Not Available | Positive | 563932 - 564876 | 35686.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





