Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C5P43_02605 | Not Available | Positive | 486165 - 486383 | 8585.29 |
| nitrate/nitrite transporter nark | C5P43_02610 | Not Available | Positive | 486478 - 487869 | 49696.3 |
| nitrate reductase subunit alpha | C5P43_02615 | Not Available | Positive | 488262 - 492005 | 140480.0 |
| nitrate reductase subunit beta | C5P43_02620 | Not Available | Positive | 492002 - 493540 | 58065.5 |
| nitrate reductase molybdenum cofactor assembly chaperone | C5P43_02625 | Not Available | Positive | 493537 - 494247 | 26444.3 |
| respiratory nitrate reductase subunit gamma | C5P43_02630 | Not Available | Positive | 494247 - 494924 | 25484.9 |
| Trna-tyr | Not Available | Not Available | Positive | 495286 - 495370 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 495405 - 495489 | Not Available |
| formyltetrahydrofolate deformylase | C5P43_02650 | Not Available | Negative | 495649 - 496491 | 31922.6 |
| hypothetical protein | C5P43_02655 | Not Available | Negative | 496541 - 496999 | 16991.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





