Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muropeptide transporter ampg | C5P43_02505 | Not Available | Negative | 465314 - 466789 | 53336.4 |
| hypothetical protein | C5P43_02510 | Not Available | Negative | 466833 - 467411 | 20951.3 |
| protein bola | C5P43_02515 | Not Available | Positive | 467716 - 468033 | 11994.3 |
| hypothetical protein | C5P43_02520 | Not Available | Positive | 467967 - 468230 | 9962.36 |
| trigger factor | C5P43_02525 | Not Available | Positive | 468377 - 469675 | 48195.4 |
| atp-dependent clp protease proteolytic subunit | C5P43_02530 | Not Available | Positive | 469921 - 470544 | 23188.1 |
| atp-dependent clp protease atp-binding subunit clpx | C5P43_02535 | Not Available | Positive | 470670 - 471944 | 46358.7 |
| lon protease | C5P43_02540 | Not Available | Positive | 472132 - 474486 | 87443.4 |
| dna-binding protein hu-beta | C5P43_02545 | Not Available | Positive | 474695 - 474967 | 9226.08 |
| peptidylprolyl isomerase | C5P43_02550 | Not Available | Positive | 475159 - 477030 | 68167.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





