Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfite reductase subunit beta | C5P43_38570 | Not Available | Positive | 6152756 - 6152949 | 7241.55 |
| translation inhibitor protein raia | C5P43_38575 | Not Available | Positive | 6152950 - 6153027 | 2830.15 |
| hypothetical protein | C5P43_38580 | Not Available | Positive | 6153131 - 6153178 | 1912.35 |
| hypothetical protein | C5P43_38585 | Not Available | Negative | 6153308 - 6153664 | 13144.8 |
| Trna-thr | Not Available | Not Available | Positive | 6153784 - 6153859 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 6154135 - 6154210 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 6154253 - 6154329 | Not Available |
| hypothetical protein | C5P43_38615 | Not Available | Negative | 6154377 - 6154730 | 13831.2 |
| 23s rrna (guanine(2445)-n(2))/(guanine(2069)-n(7))- methyltransferase | C5P43_38620 | Not Available | Positive | 6154731 - 6155083 | 13219.8 |
| hypothetical protein | C5P43_38625 | Not Available | Negative | 6155237 - 6155433 | 7308.73 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





