Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-amino-4,6-dideoxy-d-galactose acyltransferase | C5P43_38205 | Not Available | Positive | 6127040 - 6127196 | 5697.8 |
| hypothetical protein | C5P43_38210 | Not Available | Positive | 6127201 - 6127478 | 9977.12 |
| papc/fimd family outer membrane usher protein | C5P43_38215 | Not Available | Positive | 6127479 - 6127912 | 15522.3 |
| sulfoxide reductase heme-binding subunit yedz | C5P43_38220 | Not Available | Negative | 6127913 - 6128052 | 5309.67 |
| mononuclear molybdenum enzyme yedy | C5P43_38225 | Not Available | Negative | 6128053 - 6128346 | 11136.2 |
| alpha-2-macroglobulin | C5P43_38230 | Not Available | Positive | 6128347 - 6128780 | 16065.3 |
| glucarate dehydratase | C5P43_38235 | Not Available | Negative | 6128781 - 6128887 | 3732.55 |
| glucarate dehydratase | C5P43_38240 | Not Available | Negative | 6128908 - 6129213 | 11186.3 |
| crispr-associated endonuclease cas3'' | C5P43_38245 | Not Available | Negative | 6129214 - 6129338 | 5075.06 |
| copper oxidase | C5P43_38250 | Not Available | Negative | 6129864 - 6130077 | 7834.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





