Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain XJ_F8_1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1523103 bp
Thymine Count
1527238 bp
Guanine Count
1556544 bp
Cytosine Count
1557252 bp
Genome Length
6164137 bp
Protein-coding Genes
7060 genes
Non-Coding Genes
408 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| valine--trna ligase | C5P43_36435 | Not Available | Negative | 5977953 - 5978516 | 21755.9 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | C5P43_36440 | Not Available | Positive | 5978517 - 5979080 | 20329.1 |
| hydroxyethylthiazole kinase | C5P43_36445 | Not Available | Positive | 5979081 - 5979644 | 19586.4 |
| valine--trna ligase | C5P43_36450 | Not Available | Negative | 5979645 - 5980208 | 21784.0 |
| hypothetical protein | C5P43_36455 | Not Available | Negative | 5980209 - 5980772 | 20375.3 |
| hypothetical protein | C5P43_36460 | Not Available | Positive | 5980773 - 5981336 | 19113.0 |
| pyruvate-flavodoxin oxidoreductase | C5P43_36465 | Not Available | Positive | 5981337 - 5981900 | 20348.2 |
| hypothetical protein | C5P43_36470 | Not Available | Negative | 5981901 - 5982464 | 20391.4 |
| hydroxyethylthiazole kinase | C5P43_36475 | Not Available | Positive | 5982465 - 5983028 | 19594.4 |
| hydrogenase formation protein hypd | C5P43_36480 | Not Available | Positive | 5983029 - 5983232 | 7387.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





